Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCTPTQLTPCAPAIVGNSPPTAACCGKLKAHPASCFCQYKKDPNMKKYVNSPNGKKVFATCKVPLPKC
1L6H Chain:A ((1-68))
AGCNAGQLTVCTGAIAGGARPTAACCSSLRAQ-QGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29511 for 515 contacts (-57.3/contact) +
2D Compatibility (PS) -7189 + (NN) -9580 + (LL) -140
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -54970.0 ( -106.74 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: