Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QGGGGGECVPQLNRLLACRAYAVPGAGDPSAECCSALSSISQ----------GCACSAI----------SIMNSLPSRCHLSQINCSA
1T12 Chain:A ((3-76))
------TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVN------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30875 for 330 contacts (-93.6/contact) +
2D Compatibility (PS) -5550 + (NN) -3776 + (LL) -572
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -43873.0 ( -132.95 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: