Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VCDMDNDDFMACQPAAAATTDPQPAPSEACCATLGKADLRCLCSYKNSPWLSLYNIDPKRAMELPAKCGLTTPPDC
1L6H Chain:A ((3-68))
-CNAG--QLTVCTGAIAGGA----RPTAACCSSLRAQ-QGCFCQFAKDPRYGR-YVNSPNARKAVSSCGIALP-TC
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19986 for 484 contacts (-41.3/contact) +
2D Compatibility (PS) -6715 + (NN) -6502 + (LL) -324
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -37577.0 ( -77.64 by residue)
QMean score : 0.221
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: