Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IPVCNIDTNDLAKCRPAVTGNNPPPPGPDCCAVARVANLQCLCPYKPY--LPTVGIDPSRVRPLLANCGVNSPSCF
1N89 Chain:A ((4-67))
-------ASQLAVCASAILSG--AKPSGECCGNLRAQQ-GCFCQYAKDPTYGQ-YIRSPHARDTLTSCGLAVPHC-
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23045 for 399 contacts (-57.8/contact) +
2D Compatibility (PS) -6874 + (NN) -8331 + (LL) 640
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -42510.0 ( -106.54 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: