Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
CNINANHLEKCRPAVIGDNPPSPIKECCELLQAANL----------KCICRFKSVLPVL-AVYPSKVQALLSKCGLTTI----P-PACQALRN
1AFH Chain:A ((4-92))
CGQVASAIAPCISYARGQGS-GPSAGCCSGVRSLNNAARTTADRRAACNC-LKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV--
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46899 for 532 contacts (-88.2/contact) +
2D Compatibility (PS) -7492 + (NN) -5120 + (LL) -20
1D Compatibility (HY) -800 + (ID) 800
Total energy: -61131.0 ( -114.91 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: