Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KDECGATPPDQEALKLVPCVAAGKDPDSKPSDRCCAAVKEIGE---R----SPACLCAVLLSKIVRRV-GVKPEVAITIPKRCDLTDRPIGYKCGDYTMPSLQLKD
1BWO Chain:A ((2-78))
-------DCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIAR---GIHNLNEDNARSIPPKCGVNLP------------------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11787 for 442 contacts (-26.7/contact) +
2D Compatibility (PS) -7342 + (NN) -5571 + (LL) 1092
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -27558.0 ( -62.35 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: