Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGR-N-------PKCLCAVMLSNTARSA-GVKPAVAMTIPKRCAIANRPIGYKCGPYTLP
1AFH Chain:A ((3-80))
-------SCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LK-NAAAGVSGLNAGNAASIPSKCGVSIP------------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29722 for 509 contacts (-58.4/contact) +
2D Compatibility (PS) -6971 + (NN) -2314 + (LL) 532
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -43075.0 ( -84.63 by residue)
QMean score : 0.159
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: