Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ERCNDSGIEVLRGCPDSIDKELPTPPRPSQGCCTLVRIIGMECVCEVIN-KEIEAAIDMQKLVNVAAACGRPLAPGSQCGSYLVPGGMIRH
1N89 Chain:A ((7-65))
----------LAVCASAILSGA----KPSGECCGNLRAQQ-GCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVP-----------------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38457 for 356 contacts (-108.0/contact) +
2D Compatibility (PS) -5900 + (NN) -2748 + (LL) 412
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -49343.0 ( -138.60 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: