Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAPSSAQGTTTPADASGAVPSCASKLVTCAGYLNTTDTPPESCCDPLKEAATTQ-------AACMCAILMNKAALQAF-GVAPEQGVLLAKRCGVTNDASTCAK
1T12 Chain:A ((3-78))
-----------------TCGQVTSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTC--LKSA--AGAISGINLGKAAGLPSTCGVNIP------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29127 for 472 contacts (-61.7/contact) +
2D Compatibility (PS) -6902 + (NN) -3171 + (LL) 1332
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -43268.0 ( -91.67 by residue)
QMean score : 0.380
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: