Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APPSCPTVTTQLAPCLSYIQGGGDPSVPCCTGINNIYELAKTKEDRVAICNCLKTAFTHAGNVNPTLVAQLPKKCGISFNMPPIDKNYDCNTISMY
2ALG Chain:A ((1-92))
-MITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPY-KISASTNCATVK--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65421 for 636 contacts (-102.9/contact) +
2D Compatibility (PS) -9481 + (NN) -3916 + (LL) 304
1D Compatibility (HY) -6400 + (ID) 1950
Total energy: -86864.0 ( -136.58 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: