Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VDCGQVNSSLASCIPFLTGG---VA-------SP-----------SASCCAGVQNLKTLAPTSADRRAACECIKAAAARF------PTI----KQDAASSLPKKCGVDINIPISKTTNCQAIN
1PSY Chain:A ((25-117))
-------KDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--------RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVR---------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31760 for 416 contacts (-76.3/contact) +
2D Compatibility (PS) -6509 + (NN) -3341 + (LL) 1592
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -44068.0 ( -105.93 by residue)
QMean score : 0.291
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: