Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASSCNPSALSACAPAL---FGRAVTLGCCASLRAQ-----QPCLCQYKRDPANRAYVNGPAA-QRFTRACGLTQMKC
1HYP Chain:A ((7-73))
--SCP--DLSICLNILGGSLGT--VDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPS-
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22330 for 350 contacts (-63.8/contact) +
2D Compatibility (PS) -5829 + (NN) 389 + (LL) 436
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -32234.0 ( -92.10 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: