Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSICNVPISGLMACKPAVTPPNPSAPTSACCSALTHADMRCLCSYKNSNLLPSLGIDPNLALQLPPKCNLPRPNC
1N89 Chain:A ((4-67))
-------ASQLAVCASAILSG--AKPSGECCGNLRAQQ-GCFCQYAKDPTYGQ-YIRSPHARDTLTSCGLAVPHC
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25954 for 409 contacts (-63.5/contact) +
2D Compatibility (PS) -6884 + (NN) -7783 + (LL) 488
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -44583.0 ( -109.00 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: