Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AATCDPMALSPCATAMFSPSKPKPSADCCNKLKLQAKCMCKYATDPKFKGYIQSPDAKRVADSCHVPFPKC
1L6H Chain:A ((1-68))
-AGCNAGQLTVCTGAIAGGARP--TAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32371 for 515 contacts (-62.9/contact) +
2D Compatibility (PS) -7006 + (NN) -7452 + (LL) 68
1D Compatibility (HY) -5600 + (ID) 1200
Total energy: -53561.0 ( -104.00 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: