Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCNPVGLSPCAGAM--SGSGPPSKLCCSKLREQ-----KPCLCGYYRDPNLRQYVDSPNA-KKVATACDVHVTC
1HYP Chain:A ((10-70))
------DLSICLNILGGSLGT--VDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRS---
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18577 for 314 contacts (-59.2/contact) +
2D Compatibility (PS) -5379 + (NN) -286 + (LL) 116
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -29126.0 ( -92.76 by residue)
QMean score : 0.335
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: