Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCNPIQLSACAGAI--TGGGSPSRSCCSKLRAQ-----RPCLCRYYRDPRLRRYVRSPGA-RKVAGACQVHVRC
1HYP Chain:A ((10-70))
------DLSICLNILGGSLGT--VDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRS---
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28716 for 314 contacts (-91.5/contact) +
2D Compatibility (PS) -5156 + (NN) 3401 + (LL) 468
1D Compatibility (HY) -4800 + (ID) 600
Total energy: -35403.0 ( -112.75 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: