Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AQTCSASLANLNACAPFVV-----LGAATTPSSDCCTALQSVDHECLCNTLR-----------------------IASRVPAQCNLPPLSCGAN
1HSS Chain:A ((14-104))
-------VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV-----
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42878 for 324 contacts (-132.3/contact) +
2D Compatibility (PS) -5272 + (NN) 296 + (LL) 380
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -53074.0 ( -163.81 by residue)
QMean score : 0.384
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: