Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTCPSQLNSLNVCAPFVVPGATNTNPNAECCSALQSV--EHDCLCNTLR---------------------IAARLPSQCNLA-PVNCGNW
3OB4 Chain:A ((429-489))
---------------------------ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCD--
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22819 for 195 contacts (-117.0/contact) +
2D Compatibility (PS) -3769 + (NN) -1194 + (LL) 744
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -31688.0 ( -162.50 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: