Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QECGNDL--SNVQVCAAMVLP----G--SG----RPN-------SECCAALQST--NRDCLCNALR---------------------AATSLPSLCNLPPVD-CGINT
1W2Q Chain:A ((14-120))
SSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLD-
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38890 for 334 contacts (-116.4/contact) +
2D Compatibility (PS) -7129 + (NN) -6759 + (LL) 52
1D Compatibility (HY) -5600 + (ID) 800
Total energy: -59126.0 ( -177.02 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: