Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSADCAATAE---LLSPCASAVGN----N--PQ---------DPTPECCAVLQTADVDCICALVE----------------------STIKLPSECGLDT-PQCPSD
1SM7 Chain:A ((1-106))
QPQKCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTCPF-
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36075 for 433 contacts (-83.3/contact) +
2D Compatibility (PS) -6518 + (NN) -1921 + (LL) -76
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -49340.0 ( -113.95 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: