Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TWEVKMAGAELSDAQCKEERNLGINACKPVVYGKLPSPECCQRVRVTHL----------ECVCPVISPQLAAL--IDINRAVRLIEGCGRRVP----RHYKCGSITTP
1T12 Chain:A ((3-90))
--------------TCGQVTSNL-APCLAYLRNTGPLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV---
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30952 for 483 contacts (-64.1/contact) +
2D Compatibility (PS) -7449 + (NN) -2074 + (LL) 1432
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -43043.0 ( -89.12 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: