Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAAC-ASKLTPCFPFLNNATAQPTADCCNPIKDTVANDLECLCNLYNDPNLLSSLNITVAAALRISRECGVTTDLSACNV
1L6H Chain:A ((1-69))
-AGCNAGQLTVCTGAIAGGA-RPTAACCSSLRA----QQGCFCQFAKDPR--YGRYVNSPNARKAVSSCGIALP--TCH-
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35141 for 503 contacts (-69.9/contact) +
2D Compatibility (PS) -6855 + (NN) -512 + (LL) 1264
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -44994.0 ( -89.45 by residue)
QMean score : 0.313
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: