Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSAAECKQERKILVNACKAVITR-KPPTPYCCERLRVTHVSCVCPVIT-PQLAALIDVNYAIKVIQGCGIQVPRHSKCGSITTP
1N89 Chain:A ((7-65))
-------------LAVCASAILSGAKPSGECCGNLRAQQ-GCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVP-----------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45681 for 346 contacts (-132.0/contact) +
2D Compatibility (PS) -5570 + (NN) 39 + (LL) 1768
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -53844.0 ( -155.62 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: