Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SACSSTFFSALVQLIPCRAAVAPFSPIPPNEACCNAIKALGQ----------PCLCVLVNGPPIS-GVDRNMALQLPEKCTANFE----PCDVMK
1AFH Chain:A ((3-90))
-----SCGQVASAIAPCISYARGQGS-GPSAGCCSGVRSLNNAARTTADRRAACNC-LKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCS
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34222 for 530 contacts (-64.6/contact) +
2D Compatibility (PS) -7584 + (NN) -4917 + (LL) 512
1D Compatibility (HY) -800 + (ID) 750
Total energy: -47761.0 ( -90.12 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: