Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPSPNPSCGAQLSQLGPCARYSVPPMPGQALPAPGPECCSALGSVSR----------DCACGAI----------DIINSLPAKCGLPRISCQ
1AFH Chain:A ((3-78))
------SCGQVASAIAPCISYARGQ-----GSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVS-----
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27193 for 377 contacts (-72.1/contact) +
2D Compatibility (PS) -5867 + (NN) -4640 + (LL) 204
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -41246.0 ( -109.41 by residue)
QMean score : 0.239
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: