Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SDAC--TG---LPGLLNCAPFLL---GSVSSPD---AKCCKSLKWLSQHAINRKDKRELCKCLKVEDLKH-------KGVI----LDRAKSLPRLCKVQLPAPLIPDNID-CDKIKAADEE
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27251 for 575 contacts (-47.4/contact) +
2D Compatibility (PS) -9366 + (NN) -8388 + (LL) 464
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -48241.0 ( -83.90 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: