Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AECKNNIADLLPCQAAAQSETSTPSTECCTAVGKFKD-D-------PACLCSTIAAAQAAGF-TIDAPVAATIPKRCKLDGYPTSCSKSK
1AFH Chain:A ((3-80))
-SCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNA-AAGVSGLNAGNAASIPSKCGVSIP--------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27108 for 509 contacts (-53.3/contact) +
2D Compatibility (PS) -7202 + (NN) -1880 + (LL) 300
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -41040.0 ( -80.63 by residue)
QMean score : 0.347
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: