Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DPDQQPPCNTFMSVLSCQSATMSESTMPSPACCAALRKFHD---------ADCLCQVLLSARSAAAIANV-PFNLKAALEIPMKCALRTV-SAPPGYSCGGMVVPRSPPPTST
1AFH Chain:A ((3-91))
-----SCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LK-----NAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSR------------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70587 for 601 contacts (-117.4/contact) +
2D Compatibility (PS) -8513 + (NN) -5954 + (LL) 772
1D Compatibility (HY) -400 + (ID) 1050
Total energy: -85732.0 ( -142.65 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: