Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVDCSAAQQAMFPCLSAAVGGNPPPPSVACCAAMKSVSKLEMCQCLVNQTSTV---------------PG--L----NMTAARNIPANCNISAAADCS
1B1U Chain:A ((42-108))
---------------------------ARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI----
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15403 for 241 contacts (-63.9/contact) +
2D Compatibility (PS) -4882 + (NN) -2715 + (LL) 928
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -24472.0 ( -101.54 by residue)
QMean score : 0.340
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: