Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSNNYIQLAGCLNAVSSSAGYPGSSCCTAVSHFKN--------DVNCLCSTLVAAKNAGV-IRNMPNALTVPKRCGFKNNIP--KNFRCAGYKVGS
1AFH Chain:A ((3-91))
SCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAA-AGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSR-----
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36925 for 580 contacts (-63.7/contact) +
2D Compatibility (PS) -8057 + (NN) 606 + (LL) 92
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: -47784.0 ( -82.39 by residue)
QMean score : 0.356
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: