Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DQVCKGDFGSLVEQCLQYVQKPGPKTPPSEGCCNAINTVDIPCVCQHLP-PVVGDIVSLEKVAFVLRACGKPLEPGTKCGNYTVPPAV
1N89 Chain:A ((7-65))
-----------LAVCASAILSGA---KPSGECCGNLRAQQ-GCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVP--------------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33815 for 356 contacts (-95.0/contact) +
2D Compatibility (PS) -6054 + (NN) -5411 + (LL) 396
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -47934.0 ( -134.65 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: