Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIQSAAASLSSCLSAAGNAKAKVPPTCCTKVTALIN---T----APKCLCAVVLSPLAKKA-GIKPAIAITIPKRCNIKNR-PVGKKCGSYIIP
1BWO Chain:A ((2-82))
-------DCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIA---RGIHNLNEDNARSIPPKCGVNLPYTIS---------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35948 for 467 contacts (-77.0/contact) +
2D Compatibility (PS) -7452 + (NN) -1968 + (LL) 664
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -49004.0 ( -104.93 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: