Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SQVNAPCTWTEISEEYDYCGDSLTRGVPWVSPLKVCCDTIKLNKMKCICQVVT-KTFSQNFDFYKLSKLSHACGDLLVPGSYCGGNYH
1N89 Chain:A ((7-65))
---------------LAVCASAILSGA---KPSGECCGNLRAQQ-GCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVP----------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26267 for 356 contacts (-73.8/contact) +
2D Compatibility (PS) -5943 + (NN) -1683 + (LL) 948
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -35145.0 ( -98.72 by residue)
QMean score : 0.131
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: