Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPVCPLNRSDLGICVNVLGLISLTTSNVARCCSILAGLNNT---PLVSVCACEAVRLNILNLLGITVNLNLRLNGLLGLCRLPVQ----PGFNCLL--
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARG--QGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAG---NAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65271 for 558 contacts (-117.0/contact) +
2D Compatibility (PS) -8429 + (NN) -1266 + (LL) 448
1D Compatibility (HY) 2000 + (ID) 750
Total energy: -73268.0 ( -131.30 by residue)
QMean score : 0.312
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: