Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLQRNFLIWLLASLFYAYQYILRVIPNIIAPELITKFNISIADIGQFGGLYYIGYTFAHIPVGFALDRFGPKFVLPICVVLTFVGTLPLIYFDEWYYLTFSRIIVGVGSSASAIGIFKIASTYFSQKKSAKMASLSIIVGLLGAIYGGLPLNFLFNKFGWDYVIYAFSTFGCLLALLLFFITPNNSTEKNVSGNVFQDLKTVLFNKHIILISFFSGLMVGPLEGFADGWAKAFLCEVYQMTGDLASLLSSLIFIGMGAGSFFLAYFLERHPN-RHYEAII--ACSLAMIASFLLLFAQAGGLYVVLPTLLIIG------FASGYQVIAIYKAISYVDNSLVGLTTAVSNMIIMVFGYFFHTGIAKIVDLCWDRTVIQGNPVYGSELLIKAISIIPICLLLAVFWFVWLKKRS |
3J5Q Chain:D ((335-433)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIIFTAAAYYRPVEGLPPYKLKNTVGDYFRVTGEILSVSGGVYFFFRG-----IQYFLQRRPSVDSYSEILFFVQSLFMLVSVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIEDGKYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFIILLLAYVILT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55311 for 533 contacts (-103.8/contact) +
2D Compatibility (PS) -9622 + (NN) -5707 + (LL) 16612
1D Compatibility (HY) -10000 + (ID) 1200
Total energy: -65228.0 ( -122.38 by residue)
QMean score : 0.066
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