Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNVSERIYDSKNSLKFL---DDEIYQSIERELQRQRSQLQLIASENFASKAVMEAQGSFLTNKYAEGYIGKRYYCGCEYVDEVENLAIERLCKLFNVRFANVQPHSGSQANQAVFASLLTPGDTILGLSISCGGHLTHGAAPNLSGKWFKSIQYAIDRGTCLLDMDEVERLALEHKPKLIIAGASAYPRRMDFKRFREIADKVSAYLLADIAHYAGLIAAGEYPSPAKYAHIITSTTHKTLRGPRGGVVITNDEALHKKVQSAVFPGLQGGPLMHVIAAKAVAFKEALAPEFKAYIKRVVENAKVLAQALQKHGLSVITGGTDSHIVLVDLRPQKLTGKGAVDSLERAGITCNKNSVPFDMEKPTITSGLRFGTAAETTRGLKAENFKEIADLINEVIQGLINGNNSDVERIVKNKVKKICDDFPIY
2VMZ Chain:A ((1-405))--------------MKYLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQ-EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPGVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV--GSEQALEE-ARQRVAALTD-----


General information:
TITO was launched using:
RESULT:

Template: 2VMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -233143 for 3675 contacts (-63.4/contact) +
2D Compatibility (PS) -44018 + (NN) -24283 + (LL) 1160
1D Compatibility (HY) -37200 + (ID) 11550
Total energy: -349034.0 ( -94.98 by residue)
QMean score : 0.551

(partial model without unconserved sides chains):
PDB file : Tito_2VMZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VMZ-query.scw
PDB file : Tito_Scwrl_2VMZ.pdb: