Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILLELQFYLSLPHIFSYQQMHKNEEISEAKTSRNAEEVKEIVKTQLEGLKQLKKQLKQKLGV
1PWQ Chain:A ((27-62))
--------------------------ERNKTQEEHLKEIMKHIVKIEVKGEEAVKKEAAEKLLE
General information:
TITO was launched using:
RESULT:
Template:
1PWQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11348 for 150 contacts (75.7/contact) +
2D Compatibility (PS) -3569 + (NN) 1502 + (LL) 2568
1D Compatibility (HY) -1200 + (ID) 550
Total energy: 10099.0 ( 67.33 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_1PWQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PWQ-query.scw
PDB file :
Tito_Scwrl_1PWQ.pdb
: