Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMNTDETIFALSTVFGKSGVAVIRISGNHALKALNHFHVNKDMKPRFATLVDLYDSSDQLIDNGIAIYFPAPNSFTGEDVIELQVHGGKAVIKIVLEELSRIFVMAKPGEFLLRAFLNGKFDLTQIEGIADLIDAETKMQAKQAIKQMSGELEKLYSSWRQRLIAVQSKIEAYIDFPEDVATEKNELEKINDEVQTLVQSIQEHLNDNRRGERLREGLHIVITGEPNVGKSTLFNFLARRDIAIVSEYVGTTRD-ILEAHIDIGGYPIILSDTAGIRESSDPVESEGISRAKKRSCEA---DLRIELFPFE-QRYNINCNVI-------SSNTIYVLSKADDVINDHDI---------KISDIDFLPVSILKGIGTEKLVSVIKEKVEEKFVYDRDVPVITRQRHRNCMQKAIEHLRRF-NMNNPIELVSEDLRLAASELGV--VTGIINVEEVLDDIFNNFCVGK |
| 1EGA Chain:A ((11-238)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTE-GAYQAIYVDTPGLHME----EKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQKKMVIGNKGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74320 for 1394 contacts (-53.3/contact) +
2D Compatibility (PS) -21447 + (NN) -2826 + (LL) 17032
1D Compatibility (HY) -8000 + (ID) 2900
Total energy: -92461.0 ( -66.33 by residue)
QMean score : 0.311
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