Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNKIGFLAVFALVISSQIGSGIFML-PISLAPYSTYSLISWAISGFGAVSLALVFATLCAKFPETGGPHVYVKHAFGPTAAFFVGWTYWVIS-WVSTTALIVVGVGYLTPFLHEEIKNIHLFLELLLFTIITLINLRGVATAGRVEFLLTVIKIAVLLAIPVMALFFFN-RNNF-------I---IS-KE---MSS-LT--ISQIL---ARST-LLTLWCFVGVELATAPAGSVNNPAKTIPRAVVLGTICVAIIYFINNFAIM---GLINGN---------------DLANSRAPYVDAIKIMFSGNWHLIISIVAFVFCVGSLNAWVLSSGQVAFGLAKDRLMPQLFAKRNEHGSPFWGITTSSSGTAILLILTSNNNFAQQITSIIDFSVVSFLFVYLACSLAFLKVVIKERNYHKLLTGSIATTFCCWVILETSINTLLIASLFTTSGIPLYLFWYRRASAQ |
| 3DH4 Chain:A ((53-349)) | -GKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEK-GIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILG--I-PLMYSILGLALFALVYSI------VVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAGVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVS-EAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDPQLMASLGDIAATNLPSAANADKAYPWLT-QFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIACLIAPMLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145893 for 1578 contacts (-92.5/contact) +
2D Compatibility (PS) -24174 + (NN) 3605 + (LL) 960
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -170602.0 ( -108.11 by residue)
QMean score : -0.040
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