Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKSNIIMKVAKRHPLLDRIVIAAIVNRFFEILSSTLEHHNRVEIRGFGSFSIRSYNLKETSHLMLQKFAKNQYFKTYFRSSKKLSDLINE
4QJN Chain:A ((3-53))
---KTDLINAVAEQADLTKKEAGSA-VDAVFESIQNSLAKGEKVQLIGFGNFEVRERAARKGRNPQTGKEIDIPASKVPAFKAGKALKDAVK
General information:
TITO was launched using:
RESULT:
Template:
4QJN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26940 for 264 contacts (-102.0/contact) +
2D Compatibility (PS) -5439 + (NN) -2312 + (LL) 608
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -38083.0 ( -144.25 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_4QJN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QJN-query.scw
PDB file :
Tito_Scwrl_4QJN.pdb
: