Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINEEVVKENLKEVIERKSGKDVIALGIISSIVIKGKDIGFVLEISGDTQANEELRKNCEKAVKAIPGVGKVTVVAAGRKQAGQQRAKLHIEGVKNIIVVASGKGGVGKSTVALNLAFSLAKLKHKVALVDADIYGPSIPKMLG-------AEKLKPKIQGSRIIPIEKYGLHTISIGYFIDKDCAAMWRGPMITKALYNLL--MGTKWSDIEYLVVDTPPGTGDVHLSLMENFNLTGGIIVSTPQELALVDARKIYN-MFTKLSVPIFGIVENMSYFIQDNSKIYIFGKDGT-KVMSEELGIKLLGRIPLDPKICYASDCGNPLMLSEDLAGIYEDFAKDIRSFI |
| 4RZ3 Chain:A ((29-252)) | ---------------------------------------------------------------------------------------------SPRTIAVTSGKGGVGKSNVSLNFSLSLSKLGFRVLLLDMAIGMGNIDILLGESSSLALADWFSARLPLSELV---KSGPEHLS--YIAGGTGAAQWQG-LDTASIDRFLTELQAVASQYDYLIFDMGAGASGERLYFLKSVDDV--FVVTTPEPTAMTDAYAMMKYMHAAGSEAPFSVIVNRAGKEREGYEVFERLKHVTGRFLNKD--IALLGIIPEDRTVARAVVSQTPFVLLDPAAKASKAVRQMAFRYA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130239 for 1721 contacts (-75.7/contact) +
2D Compatibility (PS) -23254 + (NN) -13109 + (LL) 6820
1D Compatibility (HY) -12000 + (ID) 3250
Total energy: -175032.0 ( -101.70 by residue)
QMean score : 0.401
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