Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQPEKTESTGLVLNIESPILIILCILSVAYFIYSEYSVEFTKKISKNDPFSRALKN---RNKLFKRFFMIR
1UZC Chain:A ((35-66))
------------------------------------SWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQT
General information:
TITO was launched using:
RESULT:
Template:
1UZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6214 for 137 contacts (45.4/contact) +
2D Compatibility (PS) -3004 + (NN) -1686 + (LL) 3364
1D Compatibility (HY) -400 + (ID) 450
Total energy: 4038.0 ( 29.47 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_1UZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UZC-query.scw
PDB file :
Tito_Scwrl_1UZC.pdb
: