Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSSNDETKKKHEIDDLPKFFKEKSKEIGKAFSNKVVEISIIRSISVTSDEQEFSFKLRLLTIVDKDTHSIWILR
2NRK Chain:A ((11-43))
---------------AWVEQFEEEAQALKQILKENCLKVEHIGSTSVPNLAAKPIIDFLVIVEEIEKVDLLQWEF
General information:
TITO was launched using:
RESULT:
Template:
2NRK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5910 for 140 contacts (-42.2/contact) +
2D Compatibility (PS) -3492 + (NN) -1229 + (LL) 664
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -12667.0 ( -90.48 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_2NRK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NRK-query.scw
PDB file :
Tito_Scwrl_2NRK.pdb
: