Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSNNIIESFGRDQLENFINYKNKIGIGALDIALNSGNKKAIEVLKSYGADIENRVD--GESRLLRALKEGNIEKMELLLS
2V5Q Chain:C ((73-133))
------------------VDAADVYGFTPLHLAAMTGHLEIVEVLLKYGADV-NAFDMTGSTPLHLAADEGHLEIVEVLLK
General information:
TITO was launched using:
RESULT:
Template:
2V5Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1161 for 430 contacts (-2.7/contact) +
2D Compatibility (PS) -6820 + (NN) -4757 + (LL) 1016
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -18022.0 ( -41.91 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_2V5Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V5Q-query.scw
PDB file :
Tito_Scwrl_2V5Q.pdb
: