Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILRNLLFLLPPEIAHSLAIM-----MLKRISYRKPIELPESLSVNCFNNKFRSPVGLAAGFDKNAEVIRSMLSFGFGFIEAGTVTKHPQYGNAKPRIFRLIEDQGVINRLGFNNKGIDYF-----LKQISETKL--DDCILGINIGKNSASKDQVSDYIDLIKMVYGKSSYIVLNISSPNTPNLRNLHNRQELSELLKSITLTRKSIDNSESVPIMLKISPDIDQQTKEDIAGLALEYKIDGLTISNTTVSRDN--LHSHHNESGGLSGRPLFKLSTELLSDIYKLTQGKILLIGCGGISSGADAYKKIKAGASLVQLYTALIYHGPRAVNKINLELAELVRKDGLSNIGEAVGCDCRF
4JS3 Chain:A ((36-389))-LMPTLQGLLDPESAHRLAVRFTSLGLLPRARFQDS----DMLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHRR


General information:
TITO was launched using:
RESULT:

Template: 4JS3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166297 for 3093 contacts (-53.8/contact) +
2D Compatibility (PS) -36890 + (NN) -19943 + (LL) 552
1D Compatibility (HY) -28400 + (ID) 7800
Total energy: -258778.0 ( -83.67 by residue)
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_4JS3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JS3-query.scw
PDB file : Tito_Scwrl_4JS3.pdb: