Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFIDEVKLYLKAGDGGDGCVSFRREKFVEFGGPNGGNGGKGGNIVFVSDANLNTLLNFRYRRHVKAGSGKSGASRDRSGTAGKNIVLKVPVGTQIIDEESEKIILDFNKPDMEFLIAQGGKGGLGNTNFKSSINRAPRHFTCGQFGEEKYVVLKLKVLSDVGIIGMPNAGKSKFLTRCSNADTKVGDYPFTTIKPHLGVAKVDNSEVVIVDIPGIITDAHLGIGLGHKFLKHVERCKILLHLIDVTHDNVVSAYNCMRN--ELELYNSDLVKKEE-----IIVLNKCDLLRKVEIFEKKNHLANYLNKEVLCLS--IGEDLQPILRLLNEKLKKGSSKKVDVYDPFKR |
3W5J Chain:A ((6-163)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------IALLGMPNTGKSTLFNRMTGGAARVGNWPGITVELLSGKILLGADMVEIIDLPGIY-DLH-GFSDDEQVVRH------------FLHDNVPDLALVILNATQIERQMSLLLQLKQLNMNIVVLLNMSDEAKQYGITIDSRKMSELLQIPVFQLSTGYQEALQAVTRALRYPTPGMAENVRTQLEQDEH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69553 for 1039 contacts (-66.9/contact) +
2D Compatibility (PS) -15514 + (NN) -4739 + (LL) 7888
1D Compatibility (HY) -10800 + (ID) 2200
Total energy: -94918.0 ( -91.36 by residue)
QMean score : 0.463
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