Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELNKIAASILLSGLIIMIVSNVVDMLYNPEKYKIEHQTMVATGSNEPQKKIEQVALDIGALMQSASLEKGKSI-AKKCIACHSFDKGGANKVGPNLWNIVGNKKAHLGDSFNYSKAMLEKGGKWGYEELFAFLKSPKDYIKGTRMAFAGISNPQEIADLVSYLRQLSDNQVALPK |
3WC8 Chain:A ((1-103)) | -----------------------------------------------------------------GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQ-APGFTYTDANKNKGITWKEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WC8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213 for 546 contacts (-0.4/contact) +
2D Compatibility (PS) -10787 + (NN) -2599 + (LL) 6416
1D Compatibility (HY) -6400 + (ID) 2200
Total energy: -15783.0 ( -28.91 by residue)
QMean score : 0.442
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