Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRKIRNLKGAYKIREFLEEKLKNIGDNIAASSVDDEDVGATTSSKKKKPATGKPTEQVILQIDDKLELGSKPDLRDSPRLS
4EP6 Chain:A ((187-220))
------------RVAEMLEDKRVNPGDGLADSLLDAARAGEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTA
General information:
TITO was launched using:
RESULT:
Template:
4EP6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5974 for 151 contacts (39.6/contact) +
2D Compatibility (PS) -3862 + (NN) -1469 + (LL) 1104
1D Compatibility (HY) -800 + (ID) 650
Total energy: 297.0 ( 1.97 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_4EP6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EP6-query.scw
PDB file :
Tito_Scwrl_4EP6.pdb
: