Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPISIKETNADQLPNEKGTRYKENKEYFYTSLKNEAIGVVITGLFITAAVMVPSVVGAVIYGIIAVLVVITTILHAIISTLSSYREMEENKVEHVNSQAIKI
3MP7 Chain:B ((23-46))
----------------------KPNWATYKRAAKITGLGIILIGLIGMLIRIVGILILGG-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3MP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2705 for 90 contacts (30.1/contact) +
2D Compatibility (PS) -2369 + (NN) -184 + (LL) 5952
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 4604.0 ( 51.16 by residue)
QMean score : 0.132
(partial model without unconserved sides chains):
PDB file :
Tito_3MP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MP7-query.scw
PDB file :
Tito_Scwrl_3MP7.pdb
: