Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFEWNTNNIIDATGGRGKSGCHNLNISTDTRNIKKGDLFIALKGKNFDGHDFLHEAFLKGAAAAVVSEDKYRNLPVIVVQDTLKALHDMASYYIRNVLVNAEVIAITGSVGKTTTKDMLHTVLSQYGV--SHVNDG-----NLNNNIGLPLTILKAPENCRYLILEMGMNKAGEIKELSKISNPNIAVITNIEPVHVENFSSLFDIAQAK-LEILYGVKNNGTLILNKDNKYYDYLLSHVDRDVVSFGRSESATVCLLNVIKNDKGLNLKIRLNNNQIMNCNLCVQGKHFVYSVLAVVAVIQNLGLNLSKLPLALENFNITKGRGSVHKAKY---NGKCIHLIDDSYNASPA----SMKAAIRTLG-----------IYSNRRKVALLGDMLELGNKSITFHMKLLDSIVKYDV---DKVYTVGKFMLKLHRLLP--GNIKGTHFNDSNQLKSNLANIVQNNDVVLVKGSRGVKMDFIVQGFIIEY |
1GQY Chain:A ((72-462)) | ------------------------------------------------------EEHIEGASVVVVSSAIKDDNPELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTFVNGGLVKSAGKNAHLGA----------SRYLIAEADESDASFLH-----LQPMVSVVTNMEPD-------DFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKVGRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQ-GAGRRFDQLGEFIRPNGK-VRLVDD-YGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTRD--LFDDFVQV--------LSQVDALIMLDVYAAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDGDLILAQGAGSVSKISRGLAESWKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183622 for 2746 contacts (-66.9/contact) +
2D Compatibility (PS) -37638 + (NN) -7409 + (LL) 3924
1D Compatibility (HY) -15600 + (ID) 5000
Total energy: -245345.0 ( -89.35 by residue)
QMean score : 0.422
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